Identification of QTLs related to cocoa resistance to three species of Phytophthora.
Identifieur interne : 002454 ( Main/Exploration ); précédent : 002453; suivant : 002455Identification of QTLs related to cocoa resistance to three species of Phytophthora.
Auteurs : A M Risterucci [France] ; D. Paulin ; M. Ducamp ; J A K. N'Goran ; C. LanaudSource :
- TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik [ 0040-5752 ] ; 2003.
Descripteurs français
- KwdFr :
- ADN des plantes (génétique), Cacaoyer (génétique), Cacaoyer (microbiologie), Cartographie chromosomique (MeSH), Croisements génétiques (MeSH), Gènes de plante (génétique), Immunité innée (génétique), Liaison génétique (MeSH), Locus de caractère quantitatif (MeSH), Maladies des plantes (génétique), Maladies des plantes (microbiologie), Marqueurs génétiques (MeSH), Phytophthora (pathogénicité), Réaction de polymérisation en chaîne (MeSH).
- MESH :
- génétique : ADN des plantes, Cacaoyer, Gènes de plante, Immunité innée, Maladies des plantes.
- microbiologie : Cacaoyer, Maladies des plantes.
- pathogénicité : Phytophthora.
- Cartographie chromosomique, Croisements génétiques, Liaison génétique, Locus de caractère quantitatif, Marqueurs génétiques, Réaction de polymérisation en chaîne.
English descriptors
- KwdEn :
- Cacao (genetics), Cacao (microbiology), Chromosome Mapping (MeSH), Crosses, Genetic (MeSH), DNA, Plant (genetics), Genes, Plant (genetics), Genetic Linkage (MeSH), Genetic Markers (MeSH), Immunity, Innate (genetics), Phytophthora (pathogenicity), Plant Diseases (genetics), Plant Diseases (microbiology), Polymerase Chain Reaction (MeSH), Quantitative Trait Loci (MeSH).
- MESH :
- chemical , genetics : DNA, Plant.
- genetics : Cacao, Genes, Plant, Immunity, Innate, Plant Diseases.
- microbiology : Cacao, Plant Diseases.
- pathogenicity : Phytophthora.
- Chromosome Mapping, Crosses, Genetic, Genetic Linkage, Genetic Markers, Polymerase Chain Reaction, Quantitative Trait Loci.
Abstract
This study aimed to compare the genetic control of cacao resistance to three species of Phytophthora: Phytophthora palmivora, Phytophthora megakarya and Phytophthora capsici. The study was conducted on 151 hybrid progenies created in Côte d'Ivoire and grown in a green-house in Montpellier. Phytophthora resistance was screened by leaf-test inoculation with two different strains per species. Selection of the best individuals for resistance to P. palmivora at a 10% selection rate, would lead to a genetic progress of 47% in the disease evaluation for this species and a genetic progress of 42% and 21% for the two other species. A genetic map with a total length of 682 cM was built with 213 markers, 190 AFLPs and 23 microsatellites. QTLs were identified using composite interval mapping. QTLs were found located in six genomic regions. One of these was detected with five strains belonging to the three Phytophthora species. Two other regions were detected with two or three strains of two different species. Three additional QTLs were detected for only one species of Phytophthora. Each QTL explained between 8 to 12% of the phenotypic variation. For each strain, between 11.5% to 27.5% of the total phenotypic variation could be explained by the QTLs identified. The identification of multiple QTLs involved in resistance to Phytophthora offers the possibility to improve durability of resistance in cocoa by a possible cumulation of many different resistance genes located in different chromosome regions using marker-aided selection.
DOI: 10.1007/s00122-003-1408-8
PubMed: 13679987
Affiliations:
Links toward previous steps (curation, corpus...)
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Theoretische und angewandte Genetik</title><idno type="ISSN">0040-5752</idno><imprint><date when="2003" type="published">2003</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Cacao (genetics)</term><term>Cacao (microbiology)</term><term>Chromosome Mapping (MeSH)</term><term>Crosses, Genetic (MeSH)</term><term>DNA, Plant (genetics)</term><term>Genes, Plant (genetics)</term><term>Genetic Linkage (MeSH)</term><term>Genetic Markers (MeSH)</term><term>Immunity, Innate (genetics)</term><term>Phytophthora (pathogenicity)</term><term>Plant Diseases (genetics)</term><term>Plant Diseases (microbiology)</term><term>Polymerase Chain Reaction (MeSH)</term><term>Quantitative Trait Loci (MeSH)</term></keywords><keywords scheme="KwdFr" xml:lang="fr"><term>ADN des plantes (génétique)</term><term>Cacaoyer (génétique)</term><term>Cacaoyer (microbiologie)</term><term>Cartographie chromosomique (MeSH)</term><term>Croisements génétiques (MeSH)</term><term>Gènes de plante (génétique)</term><term>Immunité innée (génétique)</term><term>Liaison génétique (MeSH)</term><term>Locus de caractère quantitatif (MeSH)</term><term>Maladies des plantes (génétique)</term><term>Maladies des plantes (microbiologie)</term><term>Marqueurs génétiques (MeSH)</term><term>Phytophthora (pathogénicité)</term><term>Réaction de polymérisation en chaîne (MeSH)</term></keywords><keywords scheme="MESH" type="chemical" qualifier="genetics" xml:lang="en"><term>DNA, Plant</term></keywords><keywords scheme="MESH" qualifier="genetics" xml:lang="en"><term>Cacao</term><term>Genes, Plant</term><term>Immunity, Innate</term><term>Plant Diseases</term></keywords><keywords scheme="MESH" qualifier="génétique" xml:lang="fr"><term>ADN des plantes</term><term>Cacaoyer</term><term>Gènes de plante</term><term>Immunité innée</term><term>Maladies des plantes</term></keywords><keywords scheme="MESH" qualifier="microbiologie" xml:lang="fr"><term>Cacaoyer</term><term>Maladies des plantes</term></keywords><keywords scheme="MESH" qualifier="microbiology" xml:lang="en"><term>Cacao</term><term>Plant Diseases</term></keywords><keywords scheme="MESH" qualifier="pathogenicity" xml:lang="en"><term>Phytophthora</term></keywords><keywords scheme="MESH" qualifier="pathogénicité" xml:lang="fr"><term>Phytophthora</term></keywords><keywords scheme="MESH" xml:lang="en"><term>Chromosome Mapping</term><term>Crosses, Genetic</term><term>Genetic Linkage</term><term>Genetic Markers</term><term>Polymerase Chain Reaction</term><term>Quantitative Trait Loci</term></keywords><keywords scheme="MESH" xml:lang="fr"><term>Cartographie chromosomique</term><term>Croisements génétiques</term><term>Liaison génétique</term><term>Locus de caractère quantitatif</term><term>Marqueurs génétiques</term><term>Réaction de polymérisation en chaîne</term></keywords></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">This study aimed to compare the genetic control of cacao resistance to three species of Phytophthora: Phytophthora palmivora, Phytophthora megakarya and Phytophthora capsici. The study was conducted on 151 hybrid progenies created in Côte d'Ivoire and grown in a green-house in Montpellier. Phytophthora resistance was screened by leaf-test inoculation with two different strains per species. Selection of the best individuals for resistance to P. palmivora at a 10% selection rate, would lead to a genetic progress of 47% in the disease evaluation for this species and a genetic progress of 42% and 21% for the two other species. A genetic map with a total length of 682 cM was built with 213 markers, 190 AFLPs and 23 microsatellites. QTLs were identified using composite interval mapping. QTLs were found located in six genomic regions. One of these was detected with five strains belonging to the three Phytophthora species. Two other regions were detected with two or three strains of two different species. Three additional QTLs were detected for only one species of Phytophthora. Each QTL explained between 8 to 12% of the phenotypic variation. For each strain, between 11.5% to 27.5% of the total phenotypic variation could be explained by the QTLs identified. The identification of multiple QTLs involved in resistance to Phytophthora offers the possibility to improve durability of resistance in cocoa by a possible cumulation of many different resistance genes located in different chromosome regions using marker-aided selection.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">13679987</PMID><DateCompleted><Year>2004</Year><Month>02</Month><Day>19</Day></DateCompleted><DateRevised><Year>2018</Year><Month>11</Month><Day>13</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0040-5752</ISSN><JournalIssue CitedMedium="Print"><Volume>108</Volume><Issue>1</Issue><PubDate><Year>2003</Year><Month>Dec</Month></PubDate></JournalIssue><Title>TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik</Title><ISOAbbreviation>Theor Appl Genet</ISOAbbreviation></Journal><ArticleTitle>Identification of QTLs related to cocoa resistance to three species of Phytophthora.</ArticleTitle><Pagination><MedlinePgn>168-74</MedlinePgn></Pagination><Abstract><AbstractText>This study aimed to compare the genetic control of cacao resistance to three species of Phytophthora: Phytophthora palmivora, Phytophthora megakarya and Phytophthora capsici. The study was conducted on 151 hybrid progenies created in Côte d'Ivoire and grown in a green-house in Montpellier. Phytophthora resistance was screened by leaf-test inoculation with two different strains per species. Selection of the best individuals for resistance to P. palmivora at a 10% selection rate, would lead to a genetic progress of 47% in the disease evaluation for this species and a genetic progress of 42% and 21% for the two other species. A genetic map with a total length of 682 cM was built with 213 markers, 190 AFLPs and 23 microsatellites. QTLs were identified using composite interval mapping. QTLs were found located in six genomic regions. One of these was detected with five strains belonging to the three Phytophthora species. Two other regions were detected with two or three strains of two different species. Three additional QTLs were detected for only one species of Phytophthora. Each QTL explained between 8 to 12% of the phenotypic variation. For each strain, between 11.5% to 27.5% of the total phenotypic variation could be explained by the QTLs identified. The identification of multiple QTLs involved in resistance to Phytophthora offers the possibility to improve durability of resistance in cocoa by a possible cumulation of many different resistance genes located in different chromosome regions using marker-aided selection.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Risterucci</LastName><ForeName>A M</ForeName><Initials>AM</Initials><AffiliationInfo><Affiliation>CIRAD, Centre de Cooperation Internationale en Recherche Agronomique pour le Développement, UMR 1096, avenue Agropolis, BP 5035, 34398, Montpellier cedex 5, France. ange.risterucci@cirad.fr</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Paulin</LastName><ForeName>D</ForeName><Initials>D</Initials></Author><Author ValidYN="Y"><LastName>Ducamp</LastName><ForeName>M</ForeName><Initials>M</Initials></Author><Author ValidYN="Y"><LastName>N'Goran</LastName><ForeName>J A K</ForeName><Initials>JA</Initials></Author><Author ValidYN="Y"><LastName>Lanaud</LastName><ForeName>C</ForeName><Initials>C</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D003160">Comparative Study</PublicationType><PublicationType UI="D016428">Journal Article</PublicationType><PublicationType UI="D013485">Research Support, Non-U.S. Gov't</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2003</Year><Month>09</Month><Day>13</Day></ArticleDate></Article><MedlineJournalInfo><Country>Germany</Country><MedlineTA>Theor Appl Genet</MedlineTA><NlmUniqueID>0145600</NlmUniqueID><ISSNLinking>0040-5752</ISSNLinking></MedlineJournalInfo><ChemicalList><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D018744">DNA, Plant</NameOfSubstance></Chemical><Chemical><RegistryNumber>0</RegistryNumber><NameOfSubstance UI="D005819">Genetic 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Loci</DescriptorName></MeshHeading></MeshHeadingList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="received"><Year>2003</Year><Month>03</Month><Day>15</Day></PubMedPubDate><PubMedPubDate PubStatus="accepted"><Year>2003</Year><Month>05</Month><Day>15</Day></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2003</Year><Month>9</Month><Day>19</Day><Hour>5</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2004</Year><Month>2</Month><Day>20</Day><Hour>5</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="entrez"><Year>2003</Year><Month>9</Month><Day>19</Day><Hour>5</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">13679987</ArticleId><ArticleId IdType="doi">10.1007/s00122-003-1408-8</ArticleId></ArticleIdList><ReferenceList><Reference><Citation>Theor Appl Genet. 1995 Nov;91(6-7):987-93</Citation><ArticleIdList><ArticleId 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Ducamp</name><name sortKey="Lanaud, C" sort="Lanaud, C" uniqKey="Lanaud C" first="C" last="Lanaud">C. Lanaud</name><name sortKey="N Goran, J A K" sort="N Goran, J A K" uniqKey="N Goran J" first="J A K" last="N'Goran">J A K. N'Goran</name><name sortKey="Paulin, D" sort="Paulin, D" uniqKey="Paulin D" first="D" last="Paulin">D. Paulin</name></noCountry><country name="France"><region name="Occitanie (région administrative)"><name sortKey="Risterucci, A M" sort="Risterucci, A M" uniqKey="Risterucci A" first="A M" last="Risterucci">A M Risterucci</name></region></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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